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<li class="navelem"><a class="el" href="dir_8d2f594888f36d792a9b4a212d391f7f.html">cudapoa</a></li><li class="navelem"><a class="el" href="dir_8613eb7afdfdd11650d28f82119ab8e9.html">include</a></li><li class="navelem"><a class="el" href="dir_1f71e23d64293220a8931e396f64ac18.html">claragenomics</a></li><li class="navelem"><a class="el" href="dir_f76c88603f4782e2554e1f696f75813e.html">cudapoa</a></li>  </ul>
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<div class="title">cudapoa.hpp</div>  </div>
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<div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/*</span></div>
<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">* Copyright (c) 2019, NVIDIA CORPORATION.  All rights reserved.</span></div>
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">*</span></div>
<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">* NVIDIA CORPORATION and its licensors retain all intellectual property</span></div>
<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">* and proprietary rights in and to this software, related documentation</span></div>
<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">* and any modifications thereto.  Any use, reproduction, disclosure or</span></div>
<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">* distribution of this software and related documentation without an express</span></div>
<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">* license agreement from NVIDIA CORPORATION is strictly prohibited.</span></div>
<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">*/</span></div>
<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160; </div>
<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="preprocessor">#pragma once</span></div>
<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160; </div>
<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="keyword">namespace </span>claragenomics</div>
<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;{</div>
<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="keyword">namespace </span>cudapoa</div>
<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;{</div>
<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160; </div>
<div class="line"><a name="l00022"></a><span class="lineno"><a class="line" href="group__cudapoa.html#ga8ece5291074f6e07073b797d34ec24d0">   22</a></span>&#160;<span class="keyword">enum</span> <a class="code" href="group__cudapoa.html#ga8ece5291074f6e07073b797d34ec24d0">StatusType</a></div>
<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;{</div>
<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;    success = 0,</div>
<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;    exceeded_maximum_poas,</div>
<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;    exceeded_maximum_sequence_size,</div>
<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;    exceeded_maximum_sequences_per_poa,</div>
<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;    exceeded_batch_size,</div>
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;    node_count_exceeded_maximum_graph_size,</div>
<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;    edge_count_exceeded_maximum_graph_size,</div>
<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;    seq_len_exceeded_maximum_nodes_per_window,</div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;    loop_count_exceeded_upper_bound,</div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;    output_type_unavailable,</div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;    generic_error</div>
<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;};</div>
<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160; </div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<a class="code" href="group__cudapoa.html#ga8ece5291074f6e07073b797d34ec24d0">StatusType</a> <a class="code" href="group__cudapoa.html#ga20324a870a7cad68e1b02dcc1d5b02a1">Init</a>();</div>
<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160; </div>
<div class="line"><a name="l00041"></a><span class="lineno"><a class="line" href="group__cudapoa.html#ga303d3df3e0053351dc95efab320bd037">   41</a></span>&#160;<span class="keyword">enum</span> <a class="code" href="group__cudapoa.html#ga303d3df3e0053351dc95efab320bd037">OutputType</a></div>
<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;{</div>
<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;    consensus = 0x1,</div>
<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;    msa       = 0x1 &lt;&lt; 1</div>
<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;};</div>
<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160; </div>
<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;} <span class="comment">// namespace cudapoa</span></div>
<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;} <span class="comment">// namespace claragenomics</span></div>
</div><!-- fragment --></div><!-- contents -->
<div class="ttc" id="agroup__cudapoa_html_ga20324a870a7cad68e1b02dcc1d5b02a1"><div class="ttname"><a href="group__cudapoa.html#ga20324a870a7cad68e1b02dcc1d5b02a1">claragenomics::cudapoa::Init</a></div><div class="ttdeci">StatusType Init()</div><div class="ttdoc">Initialize CUDA POA context.</div></div>
<div class="ttc" id="agroup__cudapoa_html_ga8ece5291074f6e07073b797d34ec24d0"><div class="ttname"><a href="group__cudapoa.html#ga8ece5291074f6e07073b797d34ec24d0">claragenomics::cudapoa::StatusType</a></div><div class="ttdeci">StatusType</div><div class="ttdoc">CUDA POA error type.</div><div class="ttdef"><b>Definition:</b> cudapoa.hpp:22</div></div>
<div class="ttc" id="agroup__cudapoa_html_ga303d3df3e0053351dc95efab320bd037"><div class="ttname"><a href="group__cudapoa.html#ga303d3df3e0053351dc95efab320bd037">claragenomics::cudapoa::OutputType</a></div><div class="ttdeci">OutputType</div><div class="ttdoc">OutputType - Enum for encoding type of output.</div><div class="ttdef"><b>Definition:</b> cudapoa.hpp:41</div></div>
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